liom_toolkit.registration package

Submodules

• liom_toolkit.registration.register module
  • align_annotations_to_volume()
  • align_brain_region_to_atlas()
  • align_volume_to_allen()
  • deformably_register_volume()
  • get_transformations_for_atlas()
  • rigidly_register_volume()
• liom_toolkit.registration.templating module
  • build_template()
  • build_template_for_resolution()
  • create_template()
  • load_volume_for_registration()
  • pre_register_brain()
  • update_brain_name_list()
• liom_toolkit.registration.utils module
  • construct_reference_space()
  • construct_reference_space_cache()
  • convert_allen_nrrd_to_ants()
  • download_allen_atlas()
  • download_allen_template()

Module contents